- Flaviviridae
- Denguevirus
Phylogenetic Tree
DNA Polymorphism
Genera
Eta
h
Hd
Pi
Theta (per site) from Eta
k
Flavivirus
3107
50
0.9910
0.5104
0.55122
586.962
Hepacivirus
5654
280
0.9994
0.28384
716.705
716.705
Orthoflavivirus
19110
89
0.9940
0.44554
0.37434
4058.401
Pegivirus
9403
52
1.0000
0.45027
0.47704
1964.098
Pestivirus
16447
68
0.9920
0.33544
0.41075
2718.701
1. Total Number of Mutations, Eta: Refers to the total count of mutations observed across a set of DNA sequences, providing a measure of genetic variability within a population.
2. Number of Haplotypes, h: The count of distinct haplotypes (a collection of specific genes or DNA sequences in an individual) detected in a sample, indicating genetic structure and diversity.
3. Haplotype Diversity, Hd: A measure of the variation of haplotype frequencies within a population, with values closer to 1 indicating higher diversity.
4. Nucleotide Diversity, Pi: An estimate of the average number of nucleotide differences per site between two sequences, higher values suggest greater genetic diversity.
5. Theta (per site) from Eta: An estimate based on the total number of mutations, used to measure the level of genetic variation per nucleotide site in a population.
6. Average Number of Nucleotide Differences, k: The average number of nucleotide differences observed between pairs of sequences, reflecting the average genetic distance within a population.
Phylogenetic Tree
DNA Polymorphism
Serotypes
Eta
h
Hd
Pi
Theta (per site) from Eta
k
DENV-1
7358
1984
0.9998
0.05891
0.10573
496.693
DENV-2
5995
1612
0.9997
0.06246
0.11406
406.285
DENV-3
7297
939
0.9998
0.04397
0.10057
426.08
DENV-4
6086
243
0.9995
0.05631
0.10003
559.39
DENV
7399
4544
0.9999
0.20255
0.16034
1022.663
1. Total Number of Mutations, Eta: Refers to the total count of mutations observed across a set of DNA sequences, providing a measure of genetic variability within a population.
2. Number of Haplotypes, h: The count of distinct haplotypes (a collection of specific genes or DNA sequences in an individual) detected in a sample, indicating genetic structure and diversity.
3. Haplotype Diversity, Hd: A measure of the variation of haplotype frequencies within a population, with values closer to 1 indicating higher diversity.
4. Nucleotide Diversity, Pi: An estimate of the average number of nucleotide differences per site between two sequences, higher values suggest greater genetic diversity.
5. Theta (per site) from Eta: An estimate based on the total number of mutations, used to measure the level of genetic variation per nucleotide site in a population.
6. Average Number of Nucleotide Differences, k: The average number of nucleotide differences observed between pairs of sequences, reflecting the average genetic distance within a population.